Generic function SCORE-PAIR-CONSENSUS

Package:

CLARITY

Syntax:

  score-pair-consensus cl-handle timecourse-id consensus-id
  

Arguments and Values:

cl-handle---a cl-handle

timecourse-id---an integer

consensus-id---an integer

Description:

Given a time course id and a consensus id (note that the consensus id is equivalent to a tree id), score-pair-consensus computes their alignment and returns the score. It takes three parameters, cl-handle, which preserves the session; timecourse-id which identifies the timecourse dataset and consensus id which identifies the consensus sequence in the database.

Known Methods:

•   score-pair-consensus (cl-handle clarity-handle) (timecourse-id integer) (consensus-id integer)
    

Examples:

cl-prompt: (clarity:score-pair-consensus cl-handle 6 8)
  cl-prompt: 12

Affected By:

None.

Exceptional Situations:

None.

See Also:

ALIGN-CHARTS
SCORE-PAIR
ALIGN-TO-CONSENSUS
STRING-ALIGNMENT

Notes:

None.

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News

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• 2006-07-26
  Completed description.