Generic function STRING-ALIGNMENT
Package:
CLARITY
Syntax:
string-alignment string-1 string-2
Arguments and Values:
string-1
---a string
string-2
---a string
Description:
The generic function string-alignment uses a variant of the Needleman-Wunsch and Smith-Waterman algorithms to align two strings and then returns their alignment score. It takes two parameters string-1 and string-2, the strings to be aligned.
Known Methods:
-
string-alignment (string-1 string) (string-2 string)
Examples:
cl-prompt: (clarity:string-alignment "UDUUID" "UUDDID") cl-prompt: -2
Affected By:
Exceptional Situations:
None.
See Also:
SCORE-PAIR
SCORE-PAIR-CONSENSUS
ALIGN-CHARTS
ALIGN-TO-CONSENSUS
Notes:
None.
News
News in chronological order, most recent on top.
- 2006-07-26
Completed description.
© 2006, Samantha Kleinberg, all rights reserved.